134 € Santorini (Thira) (JTR) to Naxos (JNX) Cheap Flights

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Flight deals from Santorini (Thira) Airport to Naxos Airport

Looking for a cheap last-minute deal or the best return flight from Santorini (Thira) Airport to Naxos Airport? If you want to travel next month, return fares start from 138 €. Find the lowest prices on one-way and return tickets right here.

Naxos.134 € per passenger.Departing Fri, 19 Jun, returning Fri, 26 Jun.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Fri, 19 Jun, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Fri, 26 Jun, arriving in Santorini (Thira).Price includes taxes and charges.From 134 €, select.

Naxos.138 € per passenger.Departing Wed, 3 Dec, returning Mon, 8 Dec.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Wed, 3 Dec, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Mon, 8 Dec, arriving in Santorini (Thira).Price includes taxes and charges.From 138 €, select.

Naxos.138 € per passenger.Departing Sun, 30 Nov, returning Mon, 8 Dec.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Sun, 30 Nov, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Mon, 8 Dec, arriving in Santorini (Thira).Price includes taxes and charges.From 138 €, select.

Naxos.151 € per passenger.Departing Thu, 30 Apr, returning Thu, 30 Apr.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Thu, 30 Apr, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Thu, 30 Apr, arriving in Santorini (Thira).Price includes taxes and charges.From 151 €, select.

Naxos.167 € per passenger.Departing Sun, 16 Nov, returning Tue, 18 Nov.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Sun, 16 Nov, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Tue, 18 Nov, arriving in Santorini (Thira).Price includes taxes and charges.From 167 €, select.

Naxos.176 € per passenger.Departing Tue, 30 Dec, returning Mon, 5 Jan.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Tue, 30 Dec, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Mon, 5 Jan, arriving in Santorini (Thira).Price includes taxes and charges.From 176 €, select.

Naxos.181 € per passenger.Departing Mon, 7 Sep, returning Mon, 14 Sep.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Mon, 7 Sep, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Mon, 14 Sep, arriving in Santorini (Thira).Price includes taxes and charges.From 181 €, select.

Naxos.251 € per passenger.Departing Fri, 19 Jun, returning Wed, 8 Jul.Return flight with SKY express.Outbound indirect flight with SKY express, departs from Santorini (Thira) on Fri, 19 Jun, arriving in Naxos.Inbound indirect flight with SKY express, departs from Naxos on Wed, 8 Jul, arriving in Santorini (Thira).Price includes taxes and charges.From 251 €, select.

Find the cheapest month to fly from Santorini (Thira) to Naxos

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Santorini (Thira) to Naxos flights are currently cheapest in June.

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Santorini (Thira) to Naxos: Alternative routes

Compare routes from Santorini (Thira) to Naxos below. You may find an airport to fly into that's cheaper, faster, or easier than Naxos.

Santorini (Thira) to Naxos: Flight information

The things to know before you go.

Cheapest flight found	134 €
Cheapest month to fly	June

Finding cheap flights from Santorini (Thira) to Naxos: Frequently asked questions

How much are return flights from Santorini (Thira) to Naxos?

The best price we found for a return flight from Santorini (Thira) to Naxos is 134 €. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.

Which airlines fly direct from Santorini (Thira) to Naxos?

Currently, there are no airlines that fly direct from Santorini (Thira) to Naxos. But we found flights with one or more stops from 134 €.

How many flights are there a week from Santorini (Thira) to Naxos?

As of November 2025, there are no flights flying from Santorini (Thira) to Naxos.

When is the cheapest time to fly from Santorini (Thira) to Naxos?

The cheapest month to fly from Santorini (Thira) to Naxos is usually June.

Which upcoming date is cheapest to fly from Santorini (Thira) Airport to Naxos Airport on?

After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Santorini (Thira) Airport to Naxos Airport on Friday, 19 June 2026.

Can I get a direct flight from Santorini (Thira) Airport to Naxos Airport?

No airlines currently offer direct flights between Santorini (Thira) Airport and Naxos Airport. Most routes have one or more stops.

How can I find the best flight deal to Naxos?

We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Naxos but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

When is the best time to book flights to Naxos?

We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to Naxos is around 40 days in advance, so don’t leave your flight to the last minute.

Which is the cheapest airline to fly from Santorini (Thira) Airport to Naxos with?

Currently, SKY express offers the cheapest flight tickets to Naxos.

Flying from Santorini International Airport (JTR) to Naxos Airport (JNX): what you need to know

For a stress-free journey, arrive at the airport two hours ahead of international flights and an hour before domestic departures. This will give you plenty of time to board your JTR to JNX flight.
Be prepared for longer queues in popular months like July. Arriving up to four hours in advance for international flights and two hours for a domestic departure is a good idea.
If you want to explore a new city along the way, search for a flight with a stopover. To see your options for tickets from Santorini International Airport to Naxos Airport, uncheck 'Direct flights only.' Eleftherios Venizelos International Airport is a popular stop between JTR and JNX.

How to find the cheapest flights from Santorini International Airport (JTR) to Naxos Airport (JNX)

57 € is currently the best price for a one-way Santorini International Airport to Naxos Airport flight. Return flights start from 134 €. These fares may change depending on demand and availability.
It's usually smart to book in advance if you're hoping to get cheap tickets from JTR to JNX. That's because flight prices are based on demand, which tends to increase closer to the date of departure.
The 'Whole month' search tool shows you the cheapest flights from Santorini International Airport to Naxos Airport across every month. It's a good way to snap up a bargain if your plans aren't set in stone.
You won't have to check every day to find out if fares have gone down when you set up a Price Alert. We'll send you an update as soon as there's a new deal on cheap flights from JTR to JNX.
Tailor your flights with filters. Choose your departure and arrival times, airlines and total journey duration. You can also sort your results by 'Fastest,' 'Best' or 'Cheapest' flights from Santorini International Airport to Naxos Airport.

Handy information about Santorini International Airport (JTR)

Santorini International Airport gets top marks for its on-time performance. 92.74% of flights that depart JTR arrive at their destination without delay.
To get to Santorini International Airport from central Santorini (Thira), it'll take around 10 minutes if you're planning to drive. This depends on traffic, however. It's approximately 5 kilometres from the airport to the city centre.
Taking an early flight from Santorini International Airport to Naxos Airport? Avoid rushing to the airport (and get some extra shut-eye) by picking one of these hotels close to JTR:

Arriving at Naxos Airport (JNX)

The last thing you want is a lengthy journey to your hotel if you're landing late on a Santorini International Airport to Naxos Airport flight. Book one of these accommodation options near JNX instead:
Pick up a Naxos Airport rental car and discover Naxos and beyond with your own wheels. IDEA MOBILITY, Carwiz and Avance are top providers to choose from here.
For the lowest price, book your vehicle from Naxos Airport about one week before you set off.

Getting from Naxos Airport (JNX) to central Naxos

Naxos Airport is roughly 3 kilometres from central Naxos. The drive time takes about 5 minutes.
If you're using public transport, expect a journey of about 40 minutes.

When to fly to Naxos Airport (JNX)

It's time to pick your travel dates for your flight from Santorini International Airport to Naxos Airport. July is the most popular month to visit Naxos. If you're after a more low-key vibe, go in January.
The warmest month in Naxos is August, with temperatures ranging between 23ºC (73ºF) and 28ºC (82ºF). Book your flights from Santorini International Airport to Naxos Airport in this month if you like this kind of weather.
If you'd rather travel in cooler conditions, search for a cheap ticket from JTR to JNX in January. Average temperatures are between 9ºC (48ºF) and 15ºC (59ºF) then.

Explore more of Greece

You've visited Naxos, now it's time to explore more of Greece. Travel around 177 kilometres north-west to Athens to check off its leading attractions. From Museum of the Centre for the Acropolis Studies to Acropolis of Athens and The Parthenon, you've got a jam-packed schedule ahead.
If you're ready to explore another major destination in Greece, consider Thessaloniki, roughly 451 kilometres north-west of Naxos. Arch of Galerius, Aristotelous Square and Museum of Byzantine Culture are key reasons to visit.