437 € Cheap Flights from Jacksonville to San Diego

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Flight deals from Jacksonville to San Diego

Looking for a cheap last-minute deal or the best return flight from Jacksonville to San Diego? Find the lowest prices on one-way and return tickets right here.

Find the cheapest month to fly from Jacksonville to San Diego

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Jacksonville to San Diego flights are currently cheapest in June.

Alternative Jacksonville to San Diego routes

Looking for the cheapest, fastest or easiest route from Jacksonville to San Diego? You could fly into the following airports instead.

Jacksonville to San Diego: Flight information

The things to know before you go.
Cheapest flight found437 €
Cheapest month to flyJune

Finding cheap flights from Jacksonville to San Diego: Frequently asked questions

There are 2 airports in San Diego: San Diego International and McClellan-Palomar.
The best price we found for a return flight from Jacksonville to San Diego is 437 €. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
Currently, there are no airlines that fly direct from Jacksonville to San Diego. But we found flights with one or more stops from 437 €.
As of February 2026, there are no flights flying from Jacksonville to San Diego.
The cheapest month to fly from Jacksonville to San Diego is usually June.
If you're flying from Jacksonville Airport, the cheapest airport near San Diego is San Diego International – which is 4.1 km away from the centre of San Diego. We've found flights into this airport from 437 €.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Jacksonville Airport to San Diego on Tuesday, 2 June 2026.
No airlines currently offer direct flights between Jacksonville Airport and San Diego. Most routes have one or more stops.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to San Diego but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to San Diego is around 40 days in advance, so don’t leave your flight to the last minute.
In February, the average temperature is usually around 13°C. August is typically the warmest month in San Diego, when it usually averages around 28°C. You can expect the least rain in June. The coldest month is December, with temperatures averaging 10°C. The rainiest month is February.
Currently, Delta offers the cheapest flight tickets to San Diego.

Flying from Albert J Ellis Airport (OAJ) to San Diego: what you need to know

  • Albert J Ellis Airport is located in Jacksonville. Following the UTC-7 timezone, San Diego is three hours behind Jacksonville.

  • To avoid missing your OAJ to San Diego flight, leave plenty of time to check in and drop off your luggage. Arriving two hours ahead of international departures and an hour before domestic flights is the standard rule.

  • If you're jetting off during a bank holiday or another peak period, allow extra time. A good rule is two hours ahead of domestic flights and up to four hours before international departures. Queues at check-in and security will be longer.

  • Central Jacksonville to OAJ is around 18 kilometres. Depending on traffic conditions, it'll take about 20 minutes to get there if you're driving, ride-sharing or catching a cab.

  • Albert J Ellis Airport scores top marks for its on-time performance. 83.69% of flights that take off from OAJ reach their destination on time.

  • The address for OAJ is 264 State Road 1265.

How to find the cheapest flights from Albert J Ellis Airport (OAJ) to San Diego

  • The lowest price we've seen for a one-way Albert J Ellis Airport to San Diego flight is 167 €. The cheapest price for a return flight is 437 €. Remember fares may change due to demand at the time of booking.

  • To pick up cheap flights from OAJ to San Diego, book ahead. Airlines typically offer lower fares when tickets are first released.

  • The 'Whole month' search tool will show you the cheapest tickets from Albert J Ellis Airport to San Diego across the month. It's a good way to snap up a bargain if your dates aren't set in stone.

  • Save time searching for cheap flights from OAJ to San Diego by setting up a Price Alert. You'll get an email or notification through the app when fares go down.

  • Find an affordable flight from Albert J Ellis Airport to San Diego with the help of our filters. Select your ideal duration, departure time and airlines, then sort the results by 'Cheapest' for the best deals.

Airports in San Diego

San Diego International Airport (SAN)

  • San Diego International Airport (SAN) to the centre of San Diego takes around 10 minutes by car. The centre is roughly 5 kilometres away.

  • Travelling on public transport takes about 20 minutes.

  • If you're coming in on a late flight from Albert J Ellis Airport to San Diego, nothing beats the convenience of staying near the terminal. Grab your bags from the carousel and then be showered and snoozing not long after at one of these accommodation options near SAN:

  • Follow your own route with a San Diego International Airport rental car. Pick up your wheels from Thrifty, Dollar or Budget and find adventure across San Diego and beyond.

  • Booking your ride from San Diego International Airport around two weeks before your flight from OAJ to San Diego can help you get the best possible rate.

  • You'll find SAN at N Harbour Dr.

McClellan-Palomar Airport (CLD)

  • After your flight from Albert J Ellis Airport to San Diego has hit the runway, you can get to the city centre in around 40 minutes by car. Central San Diego is roughly 56 kilometres from McClellan-Palomar Airport (CLD).

  • If you're catching public transport, it'll take around 2 hours 15 minutes.

  • After stepping off your OAJ to San Diego flight, kick back at a hotel near CLD. These are some great accommodation options that'll help you switch to relaxation mode:

  • No time to waste? The fastest way to get to where you're going is with a McClellan-Palomar Airport rental car. Collect your wheels from Budget, Hertz or Avis and hit the road in a heartbeat.

  • Pick the vehicle you actually want, not just what's available, by booking your ride from CLD before your arrival. You'll also avoid paying extra, especially during busy airport times.

Best time to go to San Diego

  • Visit San Diego during peak season if you prefer a lively atmosphere, but remember that hotel prices are generally higher. Alternatively, book flights from Albert J Ellis Airport to San Diego in the low season when prices are cheaper and it's quieter.

  • The warmest month in San Diego is August, with temperatures ranging between 17ºC (63ºF) and 28ºC (82ºF). Lock in your Albert J Ellis Airport to San Diego plane ticket then if that's your ideal forecast.

  • February has average temperatures of between 7ºC (45ºF) and 23ºC (73ºF). Search for a cheap ticket from OAJ to San Diego around that time if you'd rather travel in cooler conditions.

More about San Diego

  • When it comes to searching for somewhere to lay your head, you'll find the most popular stays in San Diego right here. Check out these hotels once you've locked in your flight from Albert J Ellis Airport to San Diego:

  • All great journeys should include some sightseeing. USS Midway Museum, San Diego Zoo and SeaWorld San Diego are attractions you won't want to skip in San Diego.

Explore more of United States

  • You've seen San Diego, now it's time to explore more of United States. Journey around 177 kilometres north-west to Los Angeles to check off its top sights. From Griffith Observatory to The Broad and La Brea Tar Pits & Museum, there's plenty to keep you on the go.

  • Around 483 kilometres east of San Diego, Phoenix is another essential stop in United States. Get a taste of what this destination has to offer at Desert Botanical Garden, Heard Museum and Papago Park.

Prices shown on this page are estimated lowest prices only. Found in the last 45 days.