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96 € Cheap Flights from Guayaquil to Cuenca

Compare Guayaquil to Cuenca flight deals

Find the cheapest month or even day of the year to fly to Cuenca

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Flight deals from Guayaquil to Cuenca

Looking for a cheap last-minute deal or the best return flight from Guayaquil Airport to Cuenca Airport? If you want to travel next month, return fares start from 117 €. Find the lowest prices on one-way and return tickets right here.
Cuenca.96 € per passenger.Departing Sun, 13 Dec, returning Tue, 15 Dec.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Sun, 13 Dec, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Tue, 15 Dec, arriving in Guayaquil.Price includes taxes and charges.From 96 €, select.
Cuenca.97 € per passenger.Departing Mon, 24 Aug, returning Sun, 30 Aug.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Mon, 24 Aug, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Sun, 30 Aug, arriving in Guayaquil.Price includes taxes and charges.From 97 €, select.
Cuenca.97 € per passenger.Departing Sun, 14 Feb, returning Mon, 15 Feb.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Sun, 14 Feb, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Mon, 15 Feb, arriving in Guayaquil.Price includes taxes and charges.From 97 €, select.
Cuenca.112 € per passenger.Departing Tue, 1 Sep, returning Sat, 5 Sep.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Tue, 1 Sep, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Sat, 5 Sep, arriving in Guayaquil.Price includes taxes and charges.From 112 €, select.
Cuenca.114 € per passenger.Departing Wed, 24 Jun, returning Wed, 1 Jul.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Wed, 24 Jun, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Wed, 1 Jul, arriving in Guayaquil.Price includes taxes and charges.From 114 €, select.
Cuenca.114 € per passenger.Departing Tue, 23 Jun, returning Tue, 30 Jun.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Tue, 23 Jun, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Tue, 30 Jun, arriving in Guayaquil.Price includes taxes and charges.From 114 €, select.
Cuenca.117 € per passenger.Departing Thu, 16 Jul, returning Sun, 19 Jul.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Thu, 16 Jul, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Sun, 19 Jul, arriving in Guayaquil.Price includes taxes and charges.From 117 €, select.
Cuenca.127 € per passenger.Departing Sun, 20 Dec, returning Mon, 4 Jan.Return flight with LATAM Airlines.Outbound indirect flight with LATAM Airlines, departs from Guayaquil on Sun, 20 Dec, arriving in Cuenca.Inbound indirect flight with LATAM Airlines, departs from Cuenca on Mon, 4 Jan, arriving in Guayaquil.Price includes taxes and charges.From 127 €, select.
Cuenca.131 € per passenger.Departing Wed, 29 Jul, returning Tue, 1 Sep.Return flight with LATAM Airlines.Outbound indirect flight with LATAM Airlines, departs from Guayaquil on Wed, 29 Jul, arriving in Cuenca.Inbound indirect flight with LATAM Airlines, departs from Cuenca on Tue, 1 Sep, arriving in Guayaquil.Price includes taxes and charges.From 131 €, select.
Cuenca.132 € per passenger.Departing Mon, 19 Oct, returning Sat, 24 Oct.Return flight with LATAM Airlines.Outbound indirect flight with LATAM Airlines, departs from Guayaquil on Mon, 19 Oct, arriving in Cuenca.Inbound indirect flight with LATAM Airlines, departs from Cuenca on Sat, 24 Oct, arriving in Guayaquil.Price includes taxes and charges.From 132 €, select.
Cuenca.134 € per passenger.Departing Tue, 10 Nov, returning Mon, 23 Nov.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Tue, 10 Nov, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Mon, 23 Nov, arriving in Guayaquil.Price includes taxes and charges.From 134 €, select.
Cuenca.135 € per passenger.Departing Sun, 25 Oct, returning Mon, 9 Nov.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Sun, 25 Oct, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Mon, 9 Nov, arriving in Guayaquil.Price includes taxes and charges.From 135 €, select.
Cuenca.135 € per passenger.Departing Thu, 21 Jan, returning Sun, 24 Jan.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Thu, 21 Jan, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Sun, 24 Jan, arriving in Guayaquil.Price includes taxes and charges.From 135 €, select.
Cuenca.136 € per passenger.Departing Mon, 26 Oct, returning Thu, 29 Oct.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Mon, 26 Oct, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Thu, 29 Oct, arriving in Guayaquil.Price includes taxes and charges.From 136 €, select.
Cuenca.136 € per passenger.Departing Wed, 30 Dec, returning Sun, 3 Jan.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Wed, 30 Dec, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Sun, 3 Jan, arriving in Guayaquil.Price includes taxes and charges.From 136 €, select.
Cuenca.138 € per passenger.Departing Mon, 13 Jul, returning Tue, 11 Aug.Return flight with LATAM Airlines.Outbound direct flight with LATAM Airlines departs from Guayaquil on Mon, 13 Jul, arriving in Cuenca.Inbound direct flight with LATAM Airlines departs from Cuenca on Tue, 11 Aug, arriving in Guayaquil.Price includes taxes and charges.From 138 €, select.

Find the cheapest month to fly from Guayaquil to Cuenca

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Guayaquil to Cuenca flights are currently cheapest in December.
Jun
from 114 €
Jul
from 117 €
Aug
from 97 €
Sep
from 112 €
Oct
from 132 €
Nov
from 134 €
Dec
from 96 €
Jan
from 135 €
Feb
from 97 €
Mar
from 140 €
Apr
Find prices
May
Find prices

Direct flights from Guayaquil to Cuenca

Guayaquil to Cuenca: Alternative routes

Compare routes from Guayaquil to Cuenca below. You may find an airport to fly into that's cheaper, faster, or easier than Cuenca.

Cuenca

4km from central Cuenca
ClosestCheapest
from 96 €
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Guayaquil to Cuenca: Flight information

The things to know before you go.
Cheapest flight found96 €
Cheapest month to flyDecember
Average flight time50 mins
Most popular airlineLATAM Airlines
Average flights per week12

Finding cheap flights from Guayaquil to Cuenca: Frequently asked questions

The best price we found for a return flight from Guayaquil to Cuenca is 96 €. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
50 minutes is the average flight time from Guayaquil to Cuenca.
LATAM Airlines and LATAM Airlines Ecuador fly direct from Guayaquil to Cuenca.
As of June 2026, there are 12 flights per week flying from Guayaquil to Cuenca.
The cheapest month to fly from Guayaquil to Cuenca is usually December.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Guayaquil Airport to Cuenca Airport on Sunday, 13 December 2026.
Yes – the average flight time is 50 minutes.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Cuenca but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to Cuenca is around 40 days in advance, so don’t leave your flight to the last minute.
Currently, LATAM Airlines offers the cheapest flight tickets to Cuenca.

Flying from Guayaquil Airport (GYE) to Cuenca Airport (CUE): what you need to know

  • Around 50 minutes is how long you can expect to be travelling on a direct flight from Guayaquil Airport to Cuenca Airport.

  • Each week, there are five Guayaquil Airport to Cuenca Airport flights. If you prefer to jet off as early as possible, take the 06:00 LATAM Airlines flight. If you're eager to make the most of your time before flying, the last flight is at 17:44 with LATAM Airlines.

  • Arriving two hours before an international flight and one hour ahead of a domestic departure are travel rules to live by. Show up at the airport on time to board your GYE to CUE flight.

  • Travelling during a peak month like July? School holidays and other high seasons can result in longer queues and delays at airport checkpoints. Play things extra safe and arrive up to four hours before international flights and two hours before a domestic departure.

  • Travelling to Cuenca (and then seeing more of Ecuador!) is easy with LATAM Airlines. This popular airline has direct flights from Guayaquil Airport to Cuenca Airport.

  • The airline with the highest booking volume on this route is LATAM Airlines.

  • LATAM Airlines is a leader in on-time performance for GYE to CUE flights, with 81.4% of services reaching their destination on schedule.

  • Explore another city along the way or simply break up your flight with a stopover. Just uncheck 'Direct flights only' to see your options when searching for tickets from Guayaquil Airport to Cuenca Airport. Many travellers pass through Mariscal Sucre Quito International Airport when flying between GYE and CUE.

How to find the cheapest flights from Guayaquil Airport (GYE) to Cuenca Airport (CUE)

  • Currently, 59 € is the cheapest price we've seen for a one-way Guayaquil Airport to Cuenca Airport flight. The best price for a return ticket is 96 €. Keep in mind that fares can change due to demand when booking.

  • Don't wait until the last moment. You're more likely to get cheap tickets from GYE to CUE if you book ahead. Airlines often have some great early bird discounts.

  • May is the cheapest month for flights from Guayaquil Airport to Cuenca Airport. If you need to travel at a different time of year, the 'Whole month' tool will show you the lowest prices for each month.

  • Finding cheap flights from GYE to CUE is a breeze with Price Alerts. Simply create one of these automatic alerts and we'll notify you when a new discounted fare appears.

  • Tailor your flights using filters. Pick your ideal departure and arrival times, total journey duration and airlines. You can also sort results by 'Best,' 'Cheapest' or 'Fastest' flights from Guayaquil Airport to Cuenca Airport.

Handy information about Guayaquil Airport (GYE)

  • Guayaquil Airport gets high marks for on-time performance. 90% of flights that take off from GYE arrive at their destination on time.

  • Central Guayaquil to Guayaquil Airport is around 8 kilometres. Depending on traffic, it'll take you about 20 minutes to get there if you're ride-sharing, catching a taxi or driving.

  • Expect a trip time of about 35 minutes on public transport.

  • Need a convenient hotel near GYE? If you're catching an early flight from Guayaquil Airport to Cuenca Airport, these stays will have you sleeping moments from your departure lounge:

Arriving at Cuenca Airport (CUE)

  • Consider booking a hotel close to CUE if you're catching a late Guayaquil Airport to Cuenca Airport flight. Choose one of these options and skip the long transfer after landing:

  • Pick up a Cuenca Airport rental car and discover Cuenca and beyond with your own set of wheels. Europcar, Keddy By Europcar and Sixt are top providers to choose from here.

  • Reserving your vehicle from Cuenca Airport about two weeks ahead can help you secure the lowest rate.

When to fly to Cuenca Airport (CUE)

  • It's time to work out your trip dates for your flight from Guayaquil Airport to Cuenca Airport. June is the most popular month to visit Cuenca. If you like a more relaxed vibe, go in March.

  • The warmest month in Cuenca is November, with temperatures ranging between 8ºC (46ºF) and 19ºC (66ºF). Lock in your flights from Guayaquil Airport to Cuenca Airport in this month if this is the kind of weather you like.

  • July has average temperatures of between 3ºC (37ºF) and 15ºC (59ºF). Look for cheap tickets from GYE to CUE sometime around then if you want to travel when it's cooler.

Explore more of Ecuador

  • Cuenca has loads to offer, but there are so many other corners of Ecuador you should also see. About 129 kilometres north-west of Cuenca, a visit to Guayaquil will keep your itinerary busy. Check out popular attractions like Amazon Rainforest, Crystal Palace and Malecon 2000.

  • Around 306 kilometres north of Cuenca, Quito is another favourite stop in Ecuador. Get a taste of what this destination has to offer at Quito Historic Centre, Catedral Metropolitana de Quito and Camino de los Incas.

Plan the rest of your trip from Guayaquil to Cuenca

Prices shown on this page are estimated lowest prices only. Found in the last 12 days.